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How to Take Bullet Train from Tokyo to Hokkaido

Planning a trip from Tokyo to Hokkaido? One of the best ways to travel is by taking Shinkansen, as known as “bullet train” from Tokyo to Hakodate, the gateway to Hokkaido. It’s comfortable, efficient, and offers beautiful views of the countryside of Japan along the way.

In this article, I’ll walk you through everything you need to know about taking the Shinkansen between Tokyo and Hakodate. Don’t miss my 6 must-know tips at the end.

Let’s dive in!

Quick Summary

  • It takes 4 hours from Tokyo to Shin Hakodate Hokuto station.
  • After Shinkansen, you need to take another train to Hakodate city center (15-20 min).
  • One-way ticket costs about 23,000 JPY with a reserved seat.
  • Easy booking via Klook

Why travel From Tokyo to Hokkaido by train?

If you’re visiting Tokyo and then Hokkaido, or vice versa, you should definitely consider taking Shinkansen. Especially, if….

  • You want to visit Hakodate
  • You are going to get a JR pass
  • You enjoy traveling with countryside views

The Shinkansen to Hokkaido departs from JR Tokyo station and arrives at JR Shin Hakodate Hokuto station in Hakodate, the most southern city of Hokkaido. The line is planned to extend to Sapporo, but the schedule hasn’t been set.

Shinkansen between Tokyo and Hakodate runs 10 times every day, which allows you to travel flexibly. The ride takes about 4 hours.

Although it might sound long compared to the flight time of 1 hour 20 min between Tokyo and Hakodate, it’s not much different considering the time it takes to go to the airport, go through security checks, and wait for the boarding time at the gate.

Aerial view of Goryokaku Fort in Hakodate surrounded by cherry blossoms, a top destination accessible via the Shinkansen train from Tokyo to Hokkaido.
Hakodate Goryokaku Park

Here are the pros and cons of taking Shinkansen the bullet train to/from Hakodate, Hokkaido.

Pros

  • Money saving: If you have a JR pass, you can take Shinkansen as well as regular trains to other destinations without additional fees.
  • Comfort: Shinkansen’s seating is more spacious and has bigger legroom than airplanes. Also with the changing views, you will spend a 4 hour trip quite comfortably.
  • Less hustle: Getting on board is so much easier than a flight. No travel to the airport, no long waiting at the security control or the gate.
  • On time: Shinkansen rarely gets delayed, while flights could get delayed or canceled especially in winter, due to the weather conditions.

Cons

  • Distance beyond Hakodate: It takes quite a bit of time to travel further than Hakodate after taking Shinkansen. For example, from Hakodate, you need an additional 4 hours to Sapporo and 7 hours to Furano by train.
  • Traveling with kids: As the travel takes 4 hours on a train, the journey might get boring for kids. Bring toys to keep them entertained as long as possible!

If you don’t mind the cons, Shinkansen is a great mode of travel. I personally like a long ride like this so I can read books or listen to podcasts in a peaceful environment.

Where to stay in Hakodate

  • Century Marina
    ⭐4 stars, ♨️Hot Spring, 🍴Great Breakfast
    A high-end hotel with an infinity outdoor onsen and a high-quality breakfast buffet. Great access to the major tourist attractions in the town.
  • Hakodate Kokusai Hotel
    ⭐4 stars, 🍴Great Breakfast, ✨Modern Design
    A mid-range hotel with onsen and seafood breakfast buffet.
  • Tokyu Stay
    ⭐3 stars, 🏢Excellent Location, ♨️Hot Spring
    All rooms have a laundry machine & microwave, offer a breakfast ticket for the morning market.

Cost & ticket types

There are three main types of Shinkansen tickets.

Green car is a premium class offering more comfort, compared to standard cars. There are fewer seats per car, allowing for wider seats and bigger legroom. Each seat is equipped with a power outlet and a footrest.

  • Standard car without seat reservation: 22,580 JPY
  • Standard car with seat reservation: 23,430 JPY
  • Green car with seat reservation: 32,300 JPY

*the price might change by a few hundred yen depending on the season.

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The historic red-brick Tokyo Station at dusk, where travelers board the bullet train from Tokyo to Hokkaido, with modern skyscrapers in the background.
Tokyo station

How to Book Shinkansen

So, are you now more interested in traveling by Shinkansen? To purchase your ticket, I recommend using Klook. You can book a ticket with a few clicks, while the JR official website is difficult to navigate in English.

It’s also possible to buy a ticket at the station. Make sure to arrive early as the ticketing counter gets crowded during peak hours and high seasons.

You can also order a JR pass online via Klook for unlimited train rides including Shinkansen.

Once you buy a ticket on Klook, you will receive a QR code to collect your tickets from a ticketing machine at a station in Japan. You’ll get 2 physical tickets per passenger, and you need to insert both tickets into the ticket gate when boarding.

And make sure to pick up the tickets that come out of the gate! You’ll need them to get out of the station at your destination.

🚆JR Hokkaido Rail Pass

If you are traveling around Hokkaido by train, it could be worth getting a JR Hokkaido Rail Pass. Check out my complete guide to JR Hokkaido Rail Pass to learn about pass types, price comparisons and itineraries.

Feeling Lost About Your Hokkaido Trip?

👋Hi, I’m Yuuka, your go-to Hokkaido travel advisor.

✅ I design a custom itinerary for you.
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Insider tips you won’t find on Google

6 Must-Know Tips for Stress-Free Shinkansen Trip

  1. Should you reserve a seat? Yes, especially if you have suitcases, or if you are traveling during the high seasons or weekends. It’s always better to book your seats although it costs extra, so you can travel hassle-free.
  2. Staying for a few nights in Tokyo? For easy access to Shinkansen, choose a hotel in places like Akihabara, Ueno and Shinjuku, where you can reach Tokyo station with one short train ride.
  3. Don’t forget to get your Ekiben! (Station bento lunch box) Shinkansen stations have Ekiben stalls that sell bento that’s perfect for lunch or snack on the ride. These are not regular bento but often use local ingredients and a unique menu. Especially Tokyo station has the largest selection of Ekiben in Japan!
  4. Shinkansen has bathrooms in every other car, with a diaper changing table for babies. If you need to breastfeed, you can talk to a train staff and request using a multi-purpose room on a train.
  5. Got some suitcases with you? No worries. You can put them in a luggage space on every other car on Shinkansen. If you have carry-on size suitcases, they can be loaded on an overhead luggage rack above your seat.
  6. Want to enjoy the best views? Choose a seat on the left side, facing the direction of travel, if you’re going from Tokyo to Hakodate, and on the right side if you’re traveling from Hakodate to Tokyo. You will see some tall mountains between Tokyo and Hachinohe.

Your next steps

Now you are ready to travel by train from Tokyo to Hokkaido!

Wondering where you should visit in Hokkaido? You can explore major destinations in more detail here.

Still choosing your travel dates? Check out my guide on the best (and trickiest) times to visit Hokkaido.

And when you’re ready to start mapping out your journey, I’ve got a collection of simple, ready-made itineraries to help. Many of them are car-free!

Happy trip planning!

Plan your perfect trip with local gems and zero tourist traps.

✅ Fill your itinerary with local favorites you won’t find anywhere else.

✅ Know exactly which tourist traps to skip so you stop wasting time and money.

✅ Experience Eastern Hokkaido like you have a local friend showing you around.

Yuuka, the author of My Eastern Hokkaido

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